BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A04SP1|AL426446
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig859 1640 0.0
>3x_Contig859
Length = 2084
Score = 1640 bits (822), Expect = 0.0
Identities = 849/862 (98%), Gaps = 1/862 (0%)
Strand = Plus / Plus
Query: 1 gatccgtttttgggactaactgaaaaacttttcttgaacaatgaagttactcagaaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gatccgtttttgggactaactgaaaaacttttcttgaacaatgaagttactcagaaagct 476
Query: 61 gccactcctgcagcacctagtctcamaccatctgctccaggggcatctgttgcggggtct 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 477 gccactcctgcagcacctagtctcacaccatctgctccaggggcatctgttgcggggtct 536
Query: 121 tcaacacctggtgctgatgctgtaaagamagaaactcctgamactacggcaaamacacca 180
|||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||
Sbjct: 537 tcaacacctggtgctgatgctgtaaagacagaaactcctgacactacggcaaacacacca 596
Query: 181 atcgtgacggcgtcttctgaaaacactaataagaaaamagtgaagaaagctcccggtgct 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 597 atcgtgacggcgtcttctgaaaacactaataagaaaacagtgaagaaagctcccggtgct 656
Query: 241 gtgcatctcggtagaagagtcgattacttattcactgtcctaagagacgaagctaagggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gtgcatctcggtagaagagtcgattacttattcactgtcctaagagacgaagctaagggt 716
Query: 301 ccccaaactgatccatctcaccctgccggctcttcgtcaaccggaaccacgacgcctcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ccccaaactgatccatctcaccctgccggctcttcgtcaaccggaaccacgacgcctcag 776
Query: 361 caaaamaaacgtaaaccaaagaagtttgctactactgctgggaacagcaatgggaacgaa 420
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 777 caaaacaaacgtaaaccaaagaagtctgctactactgctgggaacagcaatgggaacgaa 836
Query: 421 aatgcccataccgctggtaccccaagtgacggcaatagtgttaamttaaccggcaaggac 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 837 aatgcccataccgctggtaccccaagtgacggcaatagtgttaacttaaccggcaaggac 896
Query: 481 tctacaccagaaaatagctccgaaacaaagcgtggcaaggcccatcaccatcaacaacca 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tctacaccagacaatagctccgaaacaaagcgtggcaaggcccatcaccatcaacaacca 956
Query: 541 tcatcaagatctggtacgcctgttgttggatcgaaaaaacagcagaggaaaggtaaagac 600
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 957 tcatcaagatctggtacgcctgtcgtcggatcgaaaaaacagcagaggaaaggtaaagac 1016
Query: 601 ataccgttggcaccaaaagccgatatccgtcttctctgacaaagaatacgacagtatgga 660
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1017 ataccgttggcaccaaaagccgatatccgtcttc-ctgacaaagaatacgacagtatgga 1075
Query: 661 cgaagaagagtgtaagaaaacgatgacaaacgtccgtagctcactcaaacgtctaagatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 cgaagaagagtgtaagaaaacgatgacaaacgtccgtagctcactcaaacgtctaagatc 1135
Query: 721 tggaggagacggtcttgaacgtaagcmatgggctaacctattgaagaaggaattgaaacg 780
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1136 tggaggagacggtcttgaacgtaagcaatgggctaacctattgaagaaggaattgaaacg 1195
Query: 781 tgttggtgactacatcgaatcgcacaagaaggactcgtctaagacctctccagaaaaata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 tgttggtgactacatcgaatcgcacaagaaggactcgtctaagacctctccagaaaaata 1255
Query: 841 taaaagacatttatggtctttc 862
||||||||||||||||||||||
Sbjct: 1256 taaaagacatttatggtctttc 1277
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4974
Number of Sequences: 1807
Number of extensions: 4974
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)